A comparative genomics approach for identifying genetic factors in Escherichia coli isolates associated with bovine diseases.

Damini KhawaskarAnbazhagan SubbaiyanDhayananth BalusamySophia Inbarajnull AbhishekObli Rajendhran Vinodh KumarViswas Konasagara NagaleekarDharmendra Kumar SinhaPallab ChaudhuriBhoj Raj SinghVinod Kumar ChaturvediPrasad Thomas

Published in: Journal of applied microbiology (2023)

The study revealed significant pathotypes, phylogroups, serotypes and sequence types associated with bovine disease conditions. These identified genetic factors can be applied for disease diagnosis, implementing vaccines and therapeutic measures. In addition, E. coli isolates from the bovine species revealed a complex pattern of disease epidemiology.

Keyphrases

escherichia coli
single cell
genome wide
risk factors
gene expression
quality improvement
cystic fibrosis