Interannual dynamics of putative parasites (Syndiniales Group II) in a coastal ecosystem.
Urania ChristakiDimitra-Ioli SkouroliakouLudwig JardillierPublished in: Environmental microbiology (2023)
Temporal dynamics of Syndiniales Group II were investigated combining 18S rDNA amplicon sequencing and direct microscopy counts (fluorescence in situ hybridization-tyramide signal amplification [FISH-TSA]) during 5 years. The study was undertaken in meso-eutrophic coastal ecosystem, dominated by diatoms, the haptophyte Phaeocystis globosa and exhibiting relatively low dinoflagellate abundance (max. 18.6 × 10 3 cells L -1 ). Consistent temporal patterns of Syndiniales Group II were observed over consecutive years highlighting the existence of local populations. According to sequencing data, Syndiniales Group II showed increasing abundance and richness in summer and autumn. Dinospores counted by microscopy, were present at low abundances and were punctuated by transient peaks. In summer dinospore highest abundance (559 × 10 3 L -1 ) and prevalence (38.5%) coincided with the peak abundance of the dinoflagellate Prorocentrum minimum (13 × 10 3 L -1 ) while in autumn Syndiniales Group II likely had more diversified hosts. Although, several peaks of dinospore and read abundances coincided, there was no consistent relation between them. Ecological assembly processes at a seasonal scale revealed that stochastic processes were the main drivers (80%) of the Group II community assembly, though deterministic processes were noticeable (20%) in June and July. This latter observation may reflect the specific Syndiniales-dinoflagellate interactions in summer.
Keyphrases
- climate change
- single molecule
- human health
- antibiotic resistance genes
- single cell
- heavy metals
- healthcare
- optical coherence tomography
- cell proliferation
- cell death
- induced apoptosis
- electronic health record
- oxidative stress
- microbial community
- cell cycle arrest
- deep learning
- label free
- peripheral blood
- atomic force microscopy
- genetic diversity