The Easy-to-Use SARS-CoV-2 Assembler for Genome Sequencing: Development Study.

Martina Reuca Emanuela Giombini Francesco Messina Barbara Bartolini Antonino di Caro Maria Rosaria Capobianchi Cesare Ernesto Maria Gruber

Published in: JMIR bioinformatics and biotechnology (2022)

In conclusion, ESCA automatically furnished a variant table output file, fundamental to rapidly recognizing variants of interest. Our pipeline could be a useful method for obtaining a complete, rapid, and accurate analysis even with minimal knowledge in bioinformatics.

Keyphrases

sars cov
healthcare
copy number
high resolution
single cell
respiratory syndrome coronavirus
genome wide
gene expression
mass spectrometry
loop mediated isothermal amplification