TIAToolbox as an end-to-end library for advanced tissue image analytics.

Johnathan PocockSimon GrahamQuoc Dang VuMostafa JahanifarSrijay DeshpandeGiorgos HadjigeorghiouAdam J ShephardRaja Muhammad Saad BashirMohsin BilalWenqi LuDavid Epstein Fayyaz Ul Amir Afsar Minhas Nasir M Rajpoot Shan E Ahmed Raza

Published in: Communications medicine (2022)

We provide a usable and adaptable library with efficient, cutting-edge, and unit-tested tools for data loading, pre-processing, model inference, post-processing, and visualization. This enables a range of users to easily build upon recent deep-learning developments in the computational pathology literature.

Keyphrases

deep learning
big data
artificial intelligence
systematic review
machine learning
convolutional neural network
electronic health record
single cell