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Complete genome sequence analysis and phylogenetic classification of the novel Aeromonas phage AHP-1, a potential member of the genus Tequatrovirus.

Chamilani NikapitiyaAmal SenevirathneS H S DananjayaNipuna TennakoonHyun-Jin ShinJehee LeeMahanama De Zoysa
Published in: Archives of virology (2022)
Aeromonas phage AHP-1 was originally isolated from crucian carp (Carassius carassius) tissue. It was able to infect Aeromonas hydrophila and A. salmonicida. Genome sequence analysis revealed a 218,317-bp-long linear genome with an overall G + C content of 47.9%, 315 open reading frames (ORFs), and 25 tRNA sequences. Its genome was found to contain 67 unique ORFs (21.26%) that did not show any homology to previously characterized proteins. A comparative genome analysis suggested that its closest neighbors are unclassified phages belonging to the genus Tequatrovirus of the subfamily Tevenvirinae.
Keyphrases
  • genome wide
  • machine learning
  • pseudomonas aeruginosa
  • gene expression
  • deep learning
  • minimally invasive
  • cystic fibrosis
  • transcription factor
  • amino acid
  • genetic diversity
  • neural network