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Single-nucleosome imaging reveals steady-state motion of interphase chromatin in living human cells.

Shiori IidaSoya ShinkaiYuji ItohSachiko TamuraMasato T KanemakiShuichi OnamiKazuhiro Maeshima
Published in: Science advances (2022)
Dynamic chromatin behavior plays a critical role in various genome functions. However, it remains unclear how chromatin behavior changes during interphase, where the nucleus enlarges and genomic DNA doubles. While the previously reported chromatin movements varied during interphase when measured using a minute or longer time scale, we unveil that local chromatin motion captured by single-nucleosome imaging/tracking on a second time scale remained steady throughout G 1 , S, and G 2 phases in live human cells. This motion mode appeared to change beyond this time scale. A defined genomic region also behaved similarly. Combined with Brownian dynamics modeling, our results suggest that this steady-state chromatin motion was mainly driven by thermal fluctuations. Steady-state motion temporarily increased following a DNA damage response. Our findings support the viscoelastic properties of chromatin. We propose that the observed steady-state chromatin motion allows cells to conduct housekeeping functions, such as transcription and DNA replication, under similar environments during interphase.
Keyphrases
  • dna damage
  • transcription factor
  • gene expression
  • genome wide
  • dna damage response
  • high resolution
  • dna methylation
  • copy number
  • dna repair
  • cell death
  • cell proliferation
  • single molecule
  • endoplasmic reticulum stress