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Synthesis, characterization and photophysical studies of dual-emissive base-modified fluorescent nucleosides.

Aditi AroraSumit KumarSandeep KumarAmita DuaBrajendra Kumar Singh
Published in: Organic & biomolecular chemistry (2024)
A straightforward and efficient methodology has been employed for the synthesis of a diverse set of base-modified fluorescent nucleoside conjugates via Cu(I)-catalysed cycloaddition reaction of 5-ethynyl-2',3',5'-tri- O -acetyluridine/3',5'-di- O -acetyl-2'-deoxyuridine with 4-(azidomethyl)- N 9 -(4'-aryl)-9,10-dihydro-2 H ,8 H -chromeno[8,7- e ][1,3]oxazin-2-ones in t BuOH to afford the desired 1,2,3-triazoles in 92-95% yields. Treatment with NaOMe/MeOH resulted in the final deprotected nucleoside analogues. The synthesized 1,2,3-triazoles demonstrated a significant emission spectrum, featuring two robust bands in the region from 350-500 nm (with excitation at 300 nm) in fluorescence studies. Photophysical investigations revealed a dual-emissive band with high fluorescence intensity, excellent Stokes shift (140-164 nm) and superior quantum yields (0.068-0.350). Furthermore, the electronic structures of the synthesized triazoles have been further verified by DFT studies. Structural characterization of all synthesized compounds was carried out using various analytical techniques, including IR, 1 H-NMR, 13 C-NMR, 1 H- 1 H COSY, 1 H- 13 C HETCOR experiments, and HRMS measurements. The dual-emissive nature of these nucleosides would be a significant contribution to nucleoside chemistry as there are limited literature reports on the same.
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