Evaluation of methylated DCR1 as a biomarker for response to adjuvant irinotecan-based therapy in stage III colon cancer: cancer and leukaemia Group B 89803 (Alliance).
Lynn SymondsMing YuYuHong ZhangFang-Shu OuTyler J ZemlaKelly T CarterMonica BertagnolliFederico InnocentiLinda Jw BoschGerrit A MeijerBeatriz CarvalhoWilliam M GradyStacey A CohenPublished in: Epigenetics (2022)
Aberrantly methylated genes contribute to the landscape of epigenetic alterations in colorectal adenocarcinoma. The global CpG Island methylator phenotype (CIMP) and individually methylated genes are potential prognostic/predictive biomarkers. Research suggests an association between methylated DCR1 (m DCR1 ) and lack of benefit with irinotecan (IFL) treatment. We assessed the association between DCR1 methylation status and survival in patients receiving adjuvant fluorouracil/ leucovorin (5-FU/LV) or IFL. We analysed data from patients with stage III colon adenocarcinoma randomly assigned to adjuvant 5-FU/LV or IFL in CALGB 89803 (Alliance). The primary endpoint was overall survival (OS), and the secondary endpoint was disease-free survival (DFS). Using tumour sample DNA, we evaluated the association between survival, DCR1 methylation status, and molecular subgroups ( BRAF, KRAS , mismatch repair status, CIMP status) using Kaplan-Meier estimator and Cox proportional hazard model. m DCR1 was observed in 221/400 (55%) colon cancers. Histopathologic features were similar between m DCR1 and unmethylated DCR1 (un DCR1 ) colon cancers. There was no difference in OS ( p = 0.83) or DFS ( p = 0.85) based on DCR1 methylation status. There was no association between methylation status and response to IFL . In patients with un DCR1 and KRAS -wildtype tumours, those who received IFL had a nearly two-fold worse DFS compared to patients who received 5-FU/LV (HR = 1.85, 95% CI (0.97-3.53, p = 0.06). This relationship was not notable among other subgroups. In stage III colon cancer patients, m DCR1 status did not associate with response to irinotecan. Larger studies may suggest an association between the iridocene response and molecular subgroups.
Keyphrases
- free survival
- genome wide
- dna methylation
- early stage
- squamous cell carcinoma
- gene expression
- radiation therapy
- stem cells
- single molecule
- mesenchymal stem cells
- young adults
- transcription factor
- machine learning
- bone marrow
- deep learning
- rectal cancer
- papillary thyroid
- wild type
- lymph node metastasis
- locally advanced
- cell therapy
- cell free
- genome wide identification