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Comparative evaluation for the globin gene depletion methods for mRNA sequencing using the whole blood-derived total RNAs.

Jin Sung JangBrianna BergEileen HolickyBruce EckloffMark MutaweMinerva M CarrasquilloNilüfer Ertekin-TanerJulie M Cuninngham
Published in: BMC genomics (2020)
In this study, our results showed that 1 μg of high-quality RNA from whole blood could be routinely used for transcriptional profiling analysis studies with globin gene and rRNA depletion pre-processing. We also demonstrated that the probe hybridization depletion method is better suited to mRNA sequencing analysis with minimal effect on RNA quality during depletion procedures.
Keyphrases
  • single cell
  • genome wide
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  • dna methylation
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  • heat stress