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The complete mitochondrial genome of the New Zealand parasitic roundworm Haemonchus contortus (Trichostrongyloidea: Haemonchidae) field strain NZ_Hco_NP.

Nikola PalevichPaul MacleanAbdul BatenRichard ScottDavid M Leathwick
Published in: Mitochondrial DNA. Part B, Resources (2019)
The complete mitochondrial genome of the New Zealand parasitic nematode Haemonchus contortus field strain NZ_Hco_NP was sequenced and annotated. The 14,001 bp-long mitogenome contains 12 protein-coding genes (atp8 gene missing), two ribosomal RNAs, 22 transfer RNAs, and a 583 bp non-coding region. Phylogenetic analysis showed that H. contortus NZ_Hco_NP forms a monophyletic cluster with the remaining three Haemonchidae species, and further illustrates the high levels of diversity and gene flow among Trichostrongylidae.
Keyphrases
  • genome wide
  • genome wide identification
  • oxidative stress
  • copy number
  • dna methylation
  • genome wide analysis
  • transcription factor
  • gene expression
  • bioinformatics analysis
  • binding protein
  • amino acid
  • genetic diversity