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Chromosome-level genome assembly of Guide Black-Fur sheep (Ovis aries).

Zengkui LuChao YuanXuejiao AnZhixiang ChenTingting GuoJianbin Liu
Published in: Scientific data (2024)
Guide Black-Fur sheep (GD) is a breed of Tibetan sheep (Ovis aries) that lives in the Qinghai-Tibetan plateau region at an altitude of over 4,000 m. However, a lack of genomic information has made it difficult to understand the high-altitude adaptation of these sheep. We sequenced and assembled the GD reference genome using PacBio, Hi-C, and Illumina sequencing technologies. The final assembled genome size was 2.73 Gb, with a contig N50 of 20.30 Mb and a scaffold N50 of 107.63 Mb. The genome is predicted to contain 20,759 protein-coding genes, of which 98.42 have functional annotations. Repeat elements account for approximately 52.2% of the genomic landscape. The completeness of the GD genome assembly is highlighted by a BUSCO score of 93.1%. This high-quality genome assembly provides a critical resource for future molecular breeding and genetic improvement of Tibetan sheep.
Keyphrases
  • genome wide
  • copy number
  • dna methylation
  • single cell
  • gene expression
  • current status
  • binding protein
  • small molecule
  • social media