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EvoAug-TF: extending evolution-inspired data augmentations for genomic deep learning to TensorFlow.

Yiyang YuShivani MuthukumarPeter K Koo
Published in: Bioinformatics (Oxford, England) (2024)
EvoAug-TF is freely available for users and is distributed under an open-source MIT license. Researchers can access the open-source code on GitHub (https://github.com/p-koo/evoaug-tf). The pre-compiled package is provided via PyPI (https://pypi.org/project/evoaug-tf) with in-depth documentation on ReadTheDocs (https://evoaug-tf.readthedocs.io). The scripts for reproducing the results are available at (https://github.com/p-koo/evoaug-tf_analysis).
Keyphrases
  • deep learning
  • electronic health record
  • machine learning
  • copy number
  • genome wide