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DENTIST-using long reads for closing assembly gaps at high accuracy.

Arne LudwigMartin PippelEugene W MyersMichael Hiller
Published in: GigaScience (2022)
DENTIST provides an accurate approach to improve the contiguity and completeness of fragmented assemblies with long reads. DENTIST's source code including a Snakemake workflow, conda package, and Docker container is available at https://github.com/a-ludi/dentist. All test assemblies as a resource for future benchmarking are at https://bds.mpi-cbg.de/hillerlab/DENTIST/.
Keyphrases
  • current status
  • electronic health record
  • mass spectrometry