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A Functional K+ Channel from Tetraselmis Virus 1, a Member of the Mimiviridae.

Kerri KukovetzBrigitte HertelChristopher R SchvarczAndrea SaponaroMirja MantheyUlrike BurkTimo GreinerGrieg F StewardJames L Van Van EttenAnna MoroniGerhard ThielOliver Rauh
Published in: Viruses (2020)
Potassium ion (K+) channels have been observed in diverse viruses that infect eukaryotic marine and freshwater algae. However, experimental evidence for functional K+ channels among these alga-infecting viruses has thus far been restricted to members of the family Phycodnaviridae, which are large, double-stranded DNA viruses within the phylum Nucleocytoviricota. Recent sequencing projects revealed that alga-infecting members of Mimiviridae, another family within this phylum, may also contain genes encoding K+ channels. Here we examine the structural features and the functional properties of putative K+ channels from four cultivated members of Mimiviridae. While all four proteins contain variations of the conserved selectivity filter sequence of K+ channels, structural prediction algorithms suggest that only two of them have the required number and position of two transmembrane domains that are present in all K+ channels. After in vitro translation and reconstitution of the four proteins in planar lipid bilayers, we confirmed that one of them, a 79 amino acid protein from the virus Tetraselmis virus 1 (TetV-1), forms a functional ion channel with a distinct selectivity for K+ over Na+ and a sensitivity to Ba2+. Thus, virus-encoded K+ channels are not limited to Phycodnaviridae but also occur in the members of Mimiviridae. The large sequence diversity among the viral K+ channels implies multiple events of lateral gene transfer.
Keyphrases
  • machine learning
  • genome wide
  • sars cov
  • single cell
  • gene expression
  • dna methylation
  • transcription factor
  • cell free
  • deep learning
  • copy number