Login / Signup

Oxadiazolines as Photoreleasable Labels for Drug Target Identification.

Corentin BonBenedikt GoretzkiMarie FlammeClaude SheltonHolly DavisFabio LimaFrancisco GarciaScott BrittainCara E Brocklehurst
Published in: Journal of the American Chemical Society (2024)
Photoaffinity labeling is a widely used technique for studying ligand-protein and protein-protein interactions. Traditional photoaffinity labels utilize nonspecific C-H bond insertion reactions mediated by a highly reactive intermediate. Despite being the most widely used photoaffinity labels, diazirines exhibit limited compatibility with downstream organic reactions and suffer from storage stability concerns. This study introduces oxadiazolines as innovative and complementary photoactivatable labels for addition to the toolbox and demonstrates their application in vitro and through in cellulo labeling experiments. Oxadiazolines can be easily synthesized from ketone moieties and cleaved with 302-330 nm light to cleanly liberate a diazo reactive moiety that can covalently modify nucleophilic amino acid residues. Notably, oxadiazolines are compatible with various organic reaction conditions and functional groups, allowing for the exploration of a large chemical space. Several known inhibitors featuring the oxadiazoline functionality were prepared without affecting their binding affinity. Furthermore, we confirmed the ability of oxadiazolines to form covalent bonds with proteins upon UV-irradiation, both in vitro and in cellulo , yielding comparable results to those of the matched diazirine compounds.
Keyphrases
  • amino acid
  • binding protein
  • water soluble
  • emergency department
  • mass spectrometry
  • radiation therapy
  • transcription factor
  • small molecule
  • electron transfer