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Solving stochastic gene-expression models using queueing theory: A tutorial review.

Juraj Szavits-NossanRamon Grima
Published in: Biophysical journal (2024)
Stochastic models of gene expression are typically formulated using the chemical master equation, which can be solved exactly or approximately using a repertoire of analytical methods. Here, we provide a tutorial review of an alternative approach based on queueing theory that has rarely been used in the literature of gene expression. We discuss the interpretation of six types of infinite-server queues from the angle of stochastic single-cell biology and provide analytical expressions for the stationary and nonstationary distributions and/or moments of mRNA/protein numbers and bounds on the Fano factor. This approach may enable the solution of complex models that have hitherto evaded analytical solution.
Keyphrases
  • gene expression
  • liquid chromatography
  • dna methylation
  • single cell
  • systematic review
  • protein protein
  • rna seq
  • mass spectrometry
  • high throughput
  • binding protein
  • high resolution