Morphometric Cell Classification for Single-Cell MALDI-Mass Spectrometry Imaging.
Klára ŠčupákováFrédéric DewezAxel K WalchRon M A HeerenBenjamin BalluffPublished in: Angewandte Chemie (International ed. in English) (2020)
The large-scale and label-free molecular characterization of single cells in their natural tissue habitat remains a major challenge in molecular biology. We present a method that integrates morphometric image analysis to delineate and classify individual cells with their single-cell-specific molecular profiles. This approach provides a new means to study spatial biological processes such as cancer field effects and the relationship between morphometric and molecular features.
Keyphrases
- single cell
- mass spectrometry
- induced apoptosis
- rna seq
- label free
- cell cycle arrest
- high resolution
- high throughput
- machine learning
- single molecule
- signaling pathway
- endoplasmic reticulum stress
- deep learning
- liquid chromatography
- papillary thyroid
- oxidative stress
- pi k akt
- high performance liquid chromatography
- photodynamic therapy
- mesenchymal stem cells
- young adults
- gas chromatography