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The complete mitochondrial genome of Sardinella zunasi (Clupeiformes: Clupeidae).

Moo-Sang KimJinho KimTae-Wook KangUiseok JeongKang-Rae KimIn-Chul Bang
Published in: Mitochondrial DNA. Part B, Resources (2021)
The complete mitogenome of Sardinella zunasi was determined by next-generation sequencing. The S. zunasi mitogenome was a circular 16,307 bp molecule that contained 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and one control region (D-loop). The gene arrangement was consistent with other Sardinella mitogenomes. The phylogenetic relationships of 29 Clupeoidei species based on 13 protein-coding genes from the available mitogenomes were analyzed. Sardinella zunasi clustered with Sardinella among Clupeidae, suggesting a closer relationship with this genus. These results will be useful for understanding the phylogenetic relationships, taxonomic classification, and phylogeography of the genus Sardinella relative to other genera of Clupeoidei.
Keyphrases
  • genome wide
  • genome wide identification
  • bioinformatics analysis
  • genome wide analysis
  • copy number
  • machine learning
  • transcription factor
  • amino acid
  • binding protein
  • circulating tumor
  • cell free