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Data-driven discovery of molecular photoswitches with multioutput Gaussian processes.

Ryan-Rhys GriffithsJake L GreenfieldAditya Raymond ThawaniArian Rokkum JamasbHenry B MossAnthony BourachedPenelope JonesWilliam McCorkindaleAlexander A AldrickMatthew John FuchterAlpha A Lee
Published in: Chemical science (2022)
Photoswitchable molecules display two or more isomeric forms that may be accessed using light. Separating the electronic absorption bands of these isomers is key to selectively addressing a specific isomer and achieving high photostationary states whilst overall red-shifting the absorption bands serves to limit material damage due to UV-exposure and increases penetration depth in photopharmacological applications. Engineering these properties into a system through synthetic design however, remains a challenge. Here, we present a data-driven discovery pipeline for molecular photoswitches underpinned by dataset curation and multitask learning with Gaussian processes. In the prediction of electronic transition wavelengths, we demonstrate that a multioutput Gaussian process (MOGP) trained using labels from four photoswitch transition wavelengths yields the strongest predictive performance relative to single-task models as well as operationally outperforming time-dependent density functional theory (TD-DFT) in terms of the wall-clock time for prediction. We validate our proposed approach experimentally by screening a library of commercially available photoswitchable molecules. Through this screen, we identified several motifs that displayed separated electronic absorption bands of their isomers, exhibited red-shifted absorptions, and are suited for information transfer and photopharmacological applications. Our curated dataset, code, as well as all models are made available at https://github.com/Ryan-Rhys/The-Photoswitch-Dataset.
Keyphrases
  • density functional theory
  • high throughput
  • molecular dynamics
  • small molecule
  • oxidative stress
  • optical coherence tomography
  • single molecule
  • molecular docking
  • social media
  • health information
  • data analysis