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Fine-grained parallelization of fitness functions in bioinformatics optimization problems: gene selection for cancer classification and biclustering of gene expression data.

Juan A Gómez-PulidoJose L Cerrada-BarriosSebastian Trinidad-AmadoJose M Lanza-GutierrezRamon A Fernandez-DiazBroderick CrawfordRicardo Soto
Published in: BMC bioinformatics (2016)
The results show better performances using reconfigurable hardware technology instead of usual microprocessors, in computing time and power consumption terms, not only because of the parallelization of the arithmetic operations, but also thanks to the concurrent fitness evaluation for several individuals of the population in the metaheuristic. This is a good basis for building accelerated and low-energy solutions for intensive computing scenarios.
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