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Chromosome-level assembly and annotation of the pearly heath Coenonympha arcania butterfly genome.

Fabrice LegeaiSandra RomainThibaut CapblancqPaul Doniol-ValcrozeMathieu JoronClaire LemaitreLaurence Després
Published in: Genome biology and evolution (2024)
We present the first chromosome-level genome assembly and annotation of the pearly heath Coenonympha arcania, generated with a PacBio HiFi sequencing approach, and complemented with Hi-C data. We additionally compare synteny, gene and repeat content between C. arcania and other Lepidopteran genomes. This reference genome will enable future population genomics studies with Coenonympha butterflies, a species-rich genus which encompasses some of the most highly endangered butterfly taxa in Europe.
Keyphrases
  • genome wide
  • copy number
  • single cell
  • rna seq
  • dna methylation
  • electronic health record
  • gene expression
  • transcription factor
  • case control
  • data analysis
  • genome wide identification