GenomicDistributions: fast analysis of genomic intervals with Bioconductor.

Kristyna Kupkova Jose Verdezoto Mosquera Jason P Smith Michał Stolarczyk Tessa L Danehy John T Lawson Bingjie Xue John T Stubbs Nathan J LeRoy Nathan C Sheffield

Published in: BMC genomics (2022)

GenomicDistributions offers a fast and scalable tool for exploratory genomic region set analysis and visualization. GenomicDistributions excels in user-friendliness, flexibility of outputs, breadth of functions, and computational performance. GenomicDistributions is available from Bioconductor ( https://bioconductor.org/packages/release/bioc/html/GenomicDistributions.html ).

Keyphrases

copy number

gene expression

genome wide

data analysis