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Systematic evaluation of isoform function in literature reports of alternative splicing.

Shamsuddin A BhuiyanSophia LyMinh PhanBrandon HuntingtonEllie HoganChao Chun LiuJames LiuPaul Pavlidis
Published in: BMC genomics (2018)
We conclude that the claim that alternative splicing vastly increases the functional repertoire of the genome is an extrapolation from a limited number of empirically supported cases. We also conclude that more work is needed to integrate experimental evidence and genome annotation databases. Our work should help shape research around the role of splicing on gene function from presuming large general effects to acknowledging the need for stronger experimental evidence.
Keyphrases
  • genome wide
  • systematic review
  • copy number
  • gene expression
  • emergency department
  • dna methylation
  • machine learning
  • transcription factor