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Elucidating the Mystery of DNA-Templating Effects on a Silver Nanocluster.

Zacharias LiasiAndreas Erbs Hillers-BendtsenLasse JensenKurt V Mikkelsen
Published in: The journal of physical chemistry letters (2023)
This presentation considers the effects that DNA-templating has on the optical properties of a 16-atom silver cluster. To accomplish this, hybrid quantum mechanical and molecular mechanical simulations of a Ag 16 -DNA complex have been carried out and compared with pure time-dependent density functional theory calculations of two Ag 16 clusters in vacuum. The presented results show that the templating DNA polymers both red-shift the one-photon absorption of the silver cluster and increase its intensity. This occurs through a change in cluster shape prompted by the structural constraints of the DNA ligands combined with silver-DNA interactions. The overall charge of the cluster also contributes to the observed optical response, as oxidation of the cluster results in a simultaneous blue-shift of the one-photon absorption and a decrease in intensity. Additionally, the changes in shape and environment also lead to a blue-shift and enhancement of the two-photon absorption.
Keyphrases
  • circulating tumor
  • single molecule
  • cell free
  • density functional theory
  • molecular dynamics
  • gold nanoparticles
  • living cells
  • nucleic acid
  • monte carlo
  • silver nanoparticles
  • circulating tumor cells
  • hydrogen peroxide