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Validation of a Circulating Tumor DNA-Based Next-Generation Sequencing Assay in a Cohort of Patients with Solid tumors: A Proposed Solution for Decentralized Plasma Testing.

Wael Al ZoughbiJesse FoxShaham BegEniko PappErika HissongKentaro OharaLaurel KeeferMichael SigourosTroy KaneDaniel BockelmanDonna NicholEmily PatchellRohan BarejaAanavi KarandikarHussein AlnajarGustavo CerqueiraVioleta Beleva GuthrieEllen VernerJyothi ManoharNoah GrecoDavid WilkesScott TagawaMurtaza S MalbariKevin HolcombKenneth Wha EngManish ShahNasser K AltorkiAndrea SbonerDavid NanusBishoy FaltasCora N SternbergJohn SimmonsYariv HouvrasAna M MolinaSamuel AngiuoliOlivier ElementoJuan Miguel Mosquera
Published in: The oncologist (2021)
This study proposes a solution for decentralized liquid biopsy testing based on validation of a next-generation sequencing (NGS) test that detects four classes of genomic alterations in blood: sequence mutations (single nucleotide substitutions or insertions and deletions), fusions, amplifications, and microsatellite instability (MSI). Although there are reference labs that perform single-site comprehensive liquid biopsy testing, the targeted assay this study validated can be established locally in any lab with capacity to offer clinical molecular pathology assays. To the authors' knowledge, this is the first report that validates evaluating an on-site plasma-based NGS test that detects the MSI status along with common sequence alterations encountered in solid tumors.
Keyphrases
  • circulating tumor
  • high throughput
  • cell free
  • circulating tumor cells
  • copy number
  • healthcare
  • cancer therapy
  • drug delivery
  • ionic liquid
  • single molecule
  • single cell
  • nucleic acid