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navigate: an open-source platform for smart light-sheet microscopy.

Zach MarinXiaoding WangDax W CollisonConor McFaddenJinlong LinHazel BorgesBingying ChenDushyant MehraQionghua ShenSeweryn GaleckiStephan DaetwylerReto FiolkaKevin M Dean
Published in: bioRxiv : the preprint server for biology (2024)
navigate is a turnkey, open-source software solution designed to enhance light-sheet fluorescence microscopy (LSFM) by integrating smart microscopy techniques into a user-friendly framework. It enables automated, intelligent imaging with a Python-based control system that supports GUI-reconfigurable acquisition routines and the integration of diverse hardware sets. As a comprehensive package, navigate democratizes access to advanced LSFM capabilities, facilitating the development and implementation of smart microscopy workflows without requiring deep programming knowledge or specialized expertise in light-sheet microscopy.
Keyphrases
  • single molecule
  • high resolution
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  • optical coherence tomography
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  • mass spectrometry
  • single cell
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