Complete mitochondrial genome of the Chihuil sea catfish Bagre panamensis (Siluriformes: Ariidae).
Jorge Saul Ramirez-PerezNancy C Saavedra-SoteloRaul Llera-HerreraQuetzalli Yasu Abadía-ChanonaPublished in: Mitochondrial DNA. Part B, Resources (2017)
The chihuil sea catfish (Bagre panamensis) is endemic of the Eastern Pacific and is a species of fishery importance in the Mexican Pacific. The complete mitochondrial genome of Bagre panamensis has been assembled from Illumina sequencing data. The circular genome was 16,714 bp in lengh, and consist of 13 protein-coding, two ribosomal RNAs (rRNAs), and 22 transfer RNA (tRNA) genes. Base composition is 30.8% A, 26.6% T, 28.2% C, and 14.4% G, and 42.6% GC content. Protein-coding genes present two start codon (ATG and GTG) and eight stop codon (TAA, TCT, CCT, TTA, CAT, AAT, ATT, and TAG). The control region possesses the highest A + T (64.4%) and lowest G + C content (35.6%) among all mitochondrial regions. These data would contribute to the evolutionary studies of related taxa.
Keyphrases
- genome wide
- oxidative stress
- dna methylation
- electronic health record
- big data
- protein protein
- south africa
- bioinformatics analysis
- gene expression
- transcription factor
- single cell
- genome wide identification
- mass spectrometry
- high resolution
- small molecule
- data analysis
- case control
- genetic diversity
- gas chromatography
- nucleic acid