GROOLS: reactive graph reasoning for genome annotation through biological processes.

Jonathan MercierAdrien JossoClaudine MédigueDavid Vallenet

Published in: BMC bioinformatics (2018)

GROOLS software is designed to evaluate the overall accuracy of functional unit and pathway predictions according to organism experimental data like growth phenotypes. It assists biocurators in the functional annotation of proteins by focusing on missing or contradictory observations.

Keyphrases

rna seq
electronic health record
data analysis
gene expression
machine learning
dna methylation
single cell
neural network
deep learning