Whole genomes from bacteria collected at diagnostic units around the world 2020.
Sidsel NagGunhild LarsenJudit SzarvasLaura Elmlund Kohl BirkedahlGábor Máté GulyásWojchiech Jakub CiokTimmie Mikkel LagermannSilva TafajSusan BradburyPeter CollignonDenise DaleyVictorien DougnonKafayath FabiyiBoubacar CoulibalyRené DembéléGeorgette NikiemaNatama MagloireIsidore Juste OuindguetaZenat Zebin HossainAnowara BegumDeyan DonchevMathew DiggleLeeAnn TurnbullSimon LévesqueLivia BerlingerKirstine Kobberoe SogaardPaula Diaz GuevaraCarolina Duarte ValderramaPanagiota MaikantiJana AmlerovaPavel DrevinekJan TkadlecMilica DilasAchim KaaschHenrik Torkil WesthMohamed Azzedine BachtarziWahiba AmhisCarolina Elisabeth Satán SalazarJoséEduardo VillacisMária Angeles Dominguez LúzonDámaris Berbel PalauClaire DuployezMaxime PalucheSolomon Asante-SefaMie MollerMargaret IpIvana MarekovićAgnes Pál-SonnevendClementiza Elvezia CocuzzaAsta DambrauskieneAlexandre MacanzeAnelsio CossaInácio MandomandoPhilip Nwajiobi-PrincewillIruka N OkekeAderemi O KehindeIni AdebiyiIfeoluwa AkintayoOluwafemi PopoolaAnthony OnipedeAnita BlomfeldtNora Elisabeth NyquistKiri BockerJames E UssherAmjad AliNimat UllahHabibullah KhanNatalie Weiler GustafsonIkhlas JarrarArif Al-HamadViravarn LuviraWantana PaveenkittipornIrmak BaranJames C L MwansaLinda SikakwaKaunda YambaRene Sjogren HendriksenFrank Moller AarestrupPublished in: Scientific data (2023)
The Two Weeks in the World research project has resulted in a dataset of 3087 clinically relevant bacterial genomes with pertaining metadata, collected from 59 diagnostic units in 35 countries around the world during 2020. A relational database is available with metadata and summary data from selected bioinformatic analysis, such as species prediction and identification of acquired resistance genes.