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Binding of SARS-CoV-2 to Cell Receptors: A Tale of Molecular Evolution.

Santiago A GómezNatalia Rojas-ValenciaSara GómezFranco EgidiChiara CappelliAlbeiro Restrepo
Published in: Chembiochem : a European journal of chemical biology (2020)
The magnified infectious power of the SARS-CoV-2 virus compared to its precursor SARS-CoV is intimately linked to an enhanced ability in the mutated virus to find available hydrogen-bond sites in the host cells. This characteristic is acquired during virus evolution because of the selective pressure exerted at the molecular level. We pinpoint the specific residue (in the virus) to residue (in the cell) contacts during the initial recognition and binding and show that the virus⋅⋅⋅cell interaction is mainly due to an extensive network of hydrogen bonds and to a large surface of noncovalent interactions. In addition to the formal quantum characterization of bonding interactions, computation of absorption spectra for the specific virus⋅⋅⋅cell interacting residues yields significant shifts of Δλmax =47 and 66 nm in the wavelength for maximum absorption in the complex with respect to the isolated host and virus, respectively.
Keyphrases
  • sars cov
  • single cell
  • cell therapy
  • stem cells
  • induced apoptosis
  • cell proliferation
  • disease virus
  • photodynamic therapy
  • bone marrow
  • molecular dynamics
  • transcription factor
  • amino acid
  • network analysis