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Sulfonium-Based Homolytic Substitution Observed for the Radical SAM Enzyme HemN.

Wenjuan JiXinjian JiQi ZhangDhanaraju MandalapuZixin DengWei DingPeng SunQi Zhang
Published in: Angewandte Chemie (International ed. in English) (2020)
Sulfur-based homolytic substitution (SH reaction) plays an important role in synthetic chemistry, yet whether such a reaction could occur on the positively charged sulfonium compounds remains unknown. In the study of the anaerobic coproporphyrinogen III oxidase HemN, a radical S-adenosyl-l-methionine (SAM) enzyme involved in heme biosynthesis, we observed the production of di-(5'-deoxyadenosyl)methylsulfonium, which supports a deoxyadenosyl (dAdo) radical-mediated SH reaction on the sulfonium center of SAM. The sulfonium-based SH reactions were then investigated in detail by density functional theory calculations and model reactions, which showed that this type of reactions is thermodynamically favorable and kinetically competent. These findings represent the first report of sulfonium-based SH reactions, which could be useful in synthetic chemistry. Our study also demonstrates the remarkable catalytic promiscuity of the radical SAM superfamily enzymes.
Keyphrases
  • density functional theory
  • molecular dynamics
  • microbial community
  • staphylococcus aureus
  • mass spectrometry
  • transcription factor
  • drug discovery
  • molecular dynamics simulations
  • high speed