DEGnext: classification of differentially expressed genes from RNA-seq data using a convolutional neural network with transfer learning.
Tulika KakatiDhruba K BhattacharyyaJugal K KalitaTrina M Norden-KrichmarPublished in: BMC bioinformatics (2022)
DEGnext can classify DEGs into UR and DR genes from RNA-seq cancer datasets with high performance. This type of analysis, using biologically relevant fine-tuning data, may aid in the exploration of potential biomarkers and can be adapted for other disease datasets.