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Molecular basis for curvature formation in SepF polymerization.

Wenjing LiuChang ZhangHua-Wei ZhangShaojie MaJing DengDaping WangZiwei ChangJun Yang
Published in: Proceedings of the National Academy of Sciences of the United States of America (2024)
The self-assembly of proteins into curved structures plays an important role in many cellular processes. One good example of this phenomenon is observed in the septum-forming protein (SepF), which forms polymerized structures with uniform curvatures. SepF is essential for regulating the thickness of the septum during bacteria cell division. In Bacillus subtilis , SepF polymerization involves two distinct interfaces, the β-β and α-α interfaces, which define the assembly unit and contact interfaces, respectively. However, the mechanism of curvature formation in this step is not yet fully understood. In this study, we employed solid-state NMR (SSNMR) to compare the structures of cyclic wild-type SepF assemblies with linear assemblies resulting from a mutation of G137 on the β-β interface. Our results demonstrate that while the sequence differences arise from the internal assembly unit, the dramatic changes in the shape of the assemblies depend on the α-α interface between the units. We further provide atomic-level insights into how the angular variation of the α2 helix on the α-α interface affects the curvature of the assemblies, using a combination of SSNMR, cryo-electron microscopy, and simulation methods. Our findings shed light on the shape control of protein assemblies and emphasize the importance of interhelical contacts in retaining curvature.
Keyphrases
  • electron microscopy
  • solid state
  • high resolution
  • bacillus subtilis
  • wild type
  • amino acid
  • protein protein
  • magnetic resonance
  • stem cells
  • binding protein
  • cell therapy
  • bone marrow
  • mesenchymal stem cells