Molecular dynamics simulations to the bidirectional adhesion signaling pathway of integrin αV β3.
Martin KulkeWalter LangelPublished in: Proteins (2019)
The bidirectional force transmission process of integrin through the cell membrane is still not well understood. Several possible mechanisms have been discussed in literature on the basis of experimental data, and in this study, we investigate these mechanisms by free and steered molecular dynamics simulations. For the first time, constant velocity pulling on the complete integrin molecule inside a dipalmitoyl-phosphatidylcholine membrane is conducted. From the results, the most likely mechanism for inside-out and outside-in signaling is the switchblade model with further separation of the transmembrane helices.
Keyphrases
- molecular dynamics simulations
- cell adhesion
- molecular docking
- cell migration
- signaling pathway
- systematic review
- big data
- pi k akt
- single molecule
- liquid chromatography
- escherichia coli
- blood flow
- cell proliferation
- mass spectrometry
- induced apoptosis
- machine learning
- biofilm formation
- pseudomonas aeruginosa
- endoplasmic reticulum stress
- artificial intelligence
- deep learning
- candida albicans