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Identification and characterization of amphibian SLC26A5 using RNA-Seq.

Zhongying WangQixuan WangHao WuZhiwu Huang
Published in: BMC genomics (2021)
We mapped and sequenced the SLC26A5 of the Rana catesbeiana from its inner ear cDNA using RNA-Seq. The Rana SLC26A5 cDNA was 2292 bp long, encoding a polypeptide of 763 amino acid residues, with 40% identity to mammals. This new coding gene could encode a functionally active protein conferring NLC to both frog HCs and the mammalian cell line. While comparing to its orthologs, the amphibian prestin has been evolutionarily changing its function and becomes more advanced than avian and teleost prestin.
Keyphrases
  • rna seq
  • amino acid
  • single cell
  • copy number
  • genome wide
  • protein protein
  • binding protein
  • genome wide identification
  • dna methylation
  • disease virus