Methicillin-Resistant Staphylococcus aureus from Diabetic Foot Infections in a Tunisian Hospital with the First Detection of MSSA CC398-t571.
Ameni ArfaouiRym Ben SallemRosa Fernández-FernándezPaula EguizábalRaoudha DziriIdris Nasir AbdullahiNoureddine SayemSalma Ben Khelifa MelkiHadda-Imene OuzariCarmen TorresNaouel KlibiPublished in: Antibiotics (Basel, Switzerland) (2022)
This study sought to analyze the antimicrobial resistant phenotypes and genotypes as well as the virulence content of S. aureus isolates recovered from patients with diabetic foot infections (DFIs) in a Tunisian hospital. Eighty-three clinical samples of 64 patients were analyzed, and bacterial isolates were identified by MALDI-TOF. The antimicrobial resistance phenotypes were determined by the Kirby-Bauer disk diffusion susceptibility test. Resistance and virulence genes, agr profile, spa and SCC mec types were determined by PCR and sequencing. S. aureus was detected in 14 of the 64 patients (21.9%), and 15 S. aureus isolates were recovered. Six out of the fifteen S. aureus isolates were methicillin-resistant (MRSA, mecA -positive) (40%). The isolates harbored the following resistance genes (number of isolates): blaZ (12), erm (B) (2), erm (A) (1), msrA (2), tet (M) (2), tet (K) (3), tet (L) (1), aac (6') -aph (2″) (2), ant (4″) (1) and fex A (1). The lukS/F-PV and tst genes were detected in three isolates. Twelve different spa -types were identified and assigned to seven clonal complexes with the predominance of agr -type III. Furthermore, the SCC mec types III, IV and V were found among the MRSA isolates. Moreover, one MSSA CC398-t571- agr -III isolate was found; it was susceptible to all antimicrobial agents and lacked luk-S/F-PV, tst, eta and etb genes. This is the first report on the prevalence and molecular characterization of S. aureus from DFIs and also the first detection of the MSSA-CC398-t571 clone in human infections in Tunisia. Our findings indicated a high prevalence S. aureus in DFIs with genetic diversity among the MSSA and MRSA isolates.
Keyphrases
- genetic diversity
- staphylococcus aureus
- methicillin resistant staphylococcus aureus
- antimicrobial resistance
- end stage renal disease
- ejection fraction
- escherichia coli
- mass spectrometry
- chronic kidney disease
- newly diagnosed
- biofilm formation
- healthcare
- pseudomonas aeruginosa
- genome wide identification
- endothelial cells
- type iii
- gene expression
- ms ms
- dna methylation
- patient reported
- sensitive detection
- high throughput sequencing