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2-Oxabicyclo[2.2.2]octane as a new bioisostere of the phenyl ring.

Vadym V LevterovYaroslav PanasiukKateryna SahunOleksandr StashkevychValentyn BadloOleh ShablykinIryna SadkovaLina BortnichukOleksii Klymenko-UlianovYuliia HolotaLeonid LachmannPetro BoryskoKateryna HorbatokIryna BodenchukYuliia BasDmytro DudenkoPavel K Mykhailiuk
Published in: Nature communications (2023)
The phenyl ring is a basic structural element in chemistry. Here, we show the design, synthesis, and validation of its new saturated bioisostere with improved physicochemical properties - 2-oxabicyclo[2.2.2]octane. The design of the structure is based on the analysis of the advantages and disadvantages of the previously used bioisosteres: bicyclo[1.1.1]pentane, bicyclo[2.2.2]octane, and cubane. The key synthesis step is the iodocyclization of cyclohexane-containing alkenyl alcohols with molecular iodine in acetonitrile. 2-Oxabicyclo[2.2.2]octane core is incorporated into the structure of Imatinib and Vorinostat (SAHA) drugs instead of the phenyl ring. In Imatinib, such replacement leads to improvement of physicochemical properties: increased water solubility, enhanced metabolic stability, and reduced lipophilicity. In Vorinostat, such replacement results in a new bioactive analog of the drug. This study enhances the repertoire of available saturated bioisosteres of (hetero)aromatic rings for the use in drug discovery projects.
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