Hybrid allele-specific ChIP-seq analysis identifies variation in brassinosteroid-responsive transcription factor binding linked to traits in maize.

Thomas HartwigMichael BanfGisele Passaia PrietschJia-Ying ZhuIsabel Mora-RamírezJos H M SchippersSamantha J SnodgrassArun S SeetharamBruno HuettelJudith M KolkmanJinliang YangJulia EngelhornZhi-Yong Wang

Published in: Genome biology (2023)

Our study provides a robust method for analyzing genome-wide variations of TF occupancy and identifies genetic and epigenetic variations of the brassinosteroid response transcription network in maize.

Keyphrases

genome wide
dna methylation
transcription factor
copy number
dna binding
gene expression
cancer therapy
circulating tumor cells
high throughput
drug delivery
network analysis
rna seq
genome wide identification