Illuminating the inner workings of a natural protein switch: Blue-light sensing in LOV-activated diguanylate cyclases.
Uršula VideDženita KasapovićMaximilian FuchsMartin P HeimböckMassimo G TotaroElfriede ZenzmaierAndreas WinklerPublished in: Science advances (2023)
Regulatory proteins play a crucial role in adaptation to environmental cues. Especially for lifestyle transitions, such as cell proliferation or apoptosis, switch-like characteristics are desirable. While nature frequently uses regulatory circuits to amplify or dampen signals, stand-alone protein switches are interesting for applications like biosensors, diagnostic tools, or optogenetics. However, such stand-alone systems frequently feature limited dynamic and operational ranges and suffer from slow response times. Here, we characterize a LOV-activated diguanylate cyclase (LadC) that offers precise temporal and spatial control of enzymatic activity with an exceptionally high dynamic range over four orders of magnitude. To establish this pronounced activation, the enzyme exhibits a two-stage activation process in which its activity is inhibited in the dark by caging its effector domains and stimulated upon illumination by the formation of an extended coiled-coil. These switch-like characteristics of the LadC system can be used to develop new optogenetic tools with tight regulation.
Keyphrases
- cell proliferation
- transcription factor
- oxidative stress
- machine learning
- metabolic syndrome
- protein protein
- amino acid
- cardiovascular disease
- endoplasmic reticulum stress
- blood brain barrier
- cell cycle
- deep learning
- binding protein
- dendritic cells
- human health
- nitric oxide
- immune response
- risk assessment
- cell cycle arrest
- neural network
- climate change
- small molecule
- type iii
- label free