Altered Epigenetic Profiles in the Placenta of Preeclamptic and Intrauterine Growth Restriction Patients.
Carter NortonDerek ClarkeJoshua HolmstromIsaac StirlandPaul R ReynoldsTim G JenkinsJuan A ArroyoPublished in: Cells (2023)
Intrauterine growth restriction (IUGR) and preeclampsia (PE) are placental pathologies known to complicate pregnancy and cause neonatal disorders. To date, there is a limited number of studies on the genetic similarity of these conditions. DNA methylation is a heritable epigenetic process that can regulate placental development. Our objective was to identify methylation patterns in placental DNA from normal, PE and IUGR-affected pregnancies. DNA was extracted, and bisulfite was converted, prior to being hybridized for the methylation array. Methylation data were SWAN normalized and differently methylated regions were identified using applications within the USEQ program. UCSC's Genome browser and Stanford's GREAT analysis were used to identify gene promoters. The commonality among affected genes was confirmed by Western blot. We observed nine significantly hypomethylated regions, two being significantly hypomethylated for both PE and IGUR. Western blot confirmed differential protein expression of commonly regulated genes. We conclude that despite the uniqueness of methylation profiles for PE and IUGR, the similarity of some methylation alterations in pathologies could explain the clinical similarities observed with these obstetric complications. These results also provide insight into the genetic similarity between PE and IUGR and suggest possible gene candidates plausibly involved in the onset of both conditions.
Keyphrases
- genome wide
- dna methylation
- copy number
- gene expression
- circulating tumor
- ejection fraction
- south africa
- cell free
- pregnancy outcomes
- single molecule
- high resolution
- high throughput
- risk factors
- prognostic factors
- newly diagnosed
- mass spectrometry
- pregnant women
- big data
- quality improvement
- patient reported outcomes
- early onset
- electronic health record
- nucleic acid