Acyclic αγα-Tripeptides with Fluorinated- and Nonfluorinated-Furanoid Sugar Framework: Importance of Fluoro Substituent in Reverse-Turn Induced Self-Assembly and Transmembrane Ion-Transport Activity.
Sachin S BuradeSopan Valiba ShindeNaresh BhumaNavanath KumbharAmol KotmalePattuparambil R RajamohananRajesh G GonnadePinaki TalukdarDilip D DhavalePublished in: The Journal of organic chemistry (2017)
Acyclic αγα-tripeptides derived from fluorinated-furanoid sugar amino acid frameworks act as reverse-turn inducers with a U-shaped conformation, whereas the corresponding nonfluorinated αγα-tripeptides show random peptide conformations. The NMR studies showed the presence of bifurcated weak intramolecular hydrogen bonding (F···HN) and N+···Fδ- charge-dipole attraction compel the amide carbonyl groups to orient antiperiplanar to the C-F bond, thus, demonstrating the role of the fluorine substituent in stabilizing the U-shaped conformation. The NOESY data indicate that the U-shaped tripeptides self-assembly formation is stabilized by the intermolecular hydrogen bonding between C═O···HN with antiparallel orientation. This fact is supported by ESI-MS data, which showed mass peaks up to the pentameric self-assembly, even in the gas phase. The morphological analysis by FE-SEM, on solid samples, showed arrangement of fibers into nanorods. The antiparallel self-assembled pore of the fluorinated tripeptides illustrates the selective ion-transport activity. The experimental findings were supported by DFT studies.
Keyphrases
- ms ms
- positron emission tomography
- amino acid
- electronic health record
- sensitive detection
- fluorescent probe
- crystal structure
- living cells
- molecular dynamics simulations
- mass spectrometry
- magnetic resonance
- high glucose
- high resolution
- diabetic rats
- machine learning
- energy transfer
- endothelial cells
- artificial intelligence
- data analysis
- quantum dots
- single molecule