Nutrient sensitive protein O -GlcNAcylation modulates the transcriptome through epigenetic mechanisms during embryonic neurogenesis.
Shama ParweenThilina T AlawathugodaAshok D PrabakaranS Thameem DheenRandall H MorseStarling Emerald BrightSuraiya Anjum AnsariPublished in: Life science alliance (2022)
Protein O -GlcNAcylation is a dynamic, nutrient-sensitive mono-glycosylation deposited on numerous nucleo-cytoplasmic and mitochondrial proteins, including transcription factors, epigenetic regulators, and histones. However, the role of protein O -GlcNAcylation on epigenome regulation in response to nutrient perturbations during development is not well understood. Herein we recapitulated early human embryonic neurogenesis in cell culture and found that pharmacological up-regulation of O -GlcNAc levels during human embryonic stem cells' neuronal differentiation leads to up-regulation of key neurogenic transcription factor genes. This transcriptional de-repression is associated with reduced H3K27me3 and increased H3K4me3 levels on the promoters of these genes, perturbing promoter bivalency possibly through increased EZH2-Thr311 phosphorylation. Elevated O -GlcNAc levels also lead to increased Pol II-Ser5 phosphorylation and affect H2BS112 O -GlcNAc and H2BK120Ub1 on promoters. Using an in vivo rat model of maternal hyperglycemia, we show similarly elevated O -GlcNAc levels and epigenetic dysregulations in the developing embryo brains because of hyperglycemia, whereas pharmacological inhibition of O -GlcNAc transferase (OGT) restored these molecular changes. Together, our results demonstrate O -GlcNAc mediated sensitivity of chromatin to nutrient status, and indicate how metabolic perturbations could affect gene expression during neurodevelopment.
Keyphrases
- gene expression
- transcription factor
- dna methylation
- genome wide
- endothelial cells
- genome wide identification
- dna binding
- embryonic stem cells
- protein protein
- spinal cord injury
- cerebral ischemia
- oxidative stress
- single cell
- amino acid
- binding protein
- single molecule
- body mass index
- long non coding rna
- rna seq
- physical activity
- subarachnoid hemorrhage
- heat shock protein