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A comparison of computational algorithms for the Bayesian analysis of clinical trials.

Ziming ChenJeffrey S BergerLana A CastellucciMichael FarkouhEwan C GoligherErinn M HadeBeverley J HuntLucy Z KornblithPatrick R LawlerEric S LeiferElizabeth LorenziMatthew D NealRyan ZarychanskiAnna Heath
Published in: Clinical trials (London, England) (2024)
Integrated Nested Laplace Approximations could reduce the computational complexity of Bayesian analysis in clinical trials as it is easy to implement in R, substantially faster than Markov Chain Monte Carlo methods implemented in JAGS and stan, and provides near identical approximations to the posterior distributions for the treatment effect. Integrated Nested Laplace Approximations was less accurate when estimating the posterior distribution for the variance of hierarchical effects, particularly for the proportional odds model, and future work should determine if the Integrated Nested Laplace Approximations algorithm can be adjusted to improve this estimation.
Keyphrases
  • clinical trial
  • monte carlo
  • machine learning
  • case control
  • deep learning
  • high resolution
  • open label
  • phase iii
  • neural network