A novel pathway-based distance score enhances assessment of disease heterogeneity in gene expression.
Xiting YanAnqi LiangJose GomezLauren CohnHongyu ZhaoGeoffrey L ChuppPublished in: BMC bioinformatics (2017)
We have developed a novel distance score that represents the biological differences between samples using gene expression data and pre-defined biological pathway information. Application of this distance score results in more accurate, robust, and biologically meaningful clustering results in both simulated data and real data when compared to traditional methods. It also has comparable or better performance compared to Pathifier.