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Single-cell analysis in hypersaline brines predicts a water-activity limit of microbial anabolic activity.

Emily R ParisNestor Arandia-GorostidiBenjamin KlempayJeff S BowmanAlexandra PontefractClaire E ElbonJennifer B GlassEllery D IngallPeter T DoranSanjoy M SomBritney E SchmidtAnne E Dekas
Published in: Science advances (2023)
Hypersaline brines provide excellent opportunities to study extreme microbial life. Here, we investigated anabolic activity in nearly 6000 individual cells from solar saltern sites with water activities ( a w ) ranging from 0.982 to 0.409 (seawater to extreme brine). Average anabolic activity decreased exponentially with a w , with nuanced trends evident at the single-cell level: The proportion of active cells remained high (>50%) even after NaCl saturation, and subsets of cells spiked in activity as a w decreased. Intracommunity heterogeneity in activity increased as seawater transitioned to brine, suggesting increased phenotypic heterogeneity with increased physiological stress. No microbial activity was detected in the 0.409- a w brine (an MgCl 2 -dominated site) despite the presence of cell-like structures. Extrapolating our data, we predict an a w limit for detectable anabolic activity of 0.540, which is beyond the currently accepted limit of life based on cell division. This work demonstrates the utility of single-cell, metabolism-based techniques for detecting active life and expands the potential habitable space on Earth and beyond.
Keyphrases
  • single cell
  • rna seq
  • microbial community
  • stem cells
  • high throughput
  • bone marrow
  • machine learning
  • cell death
  • signaling pathway
  • cell cycle arrest
  • pi k akt
  • molecularly imprinted
  • human health