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A comprehensive workflow and its validation for simulating diffuse speckle statistics for optical blood flow measurements.

Lisa Kobayashi FriskManish VermaFaruk BešlijaChen-Hao P LinNishighanda PatilSumana ChetiaJason TrobaughJoseph P CulverTurgut Durduran
Published in: bioRxiv : the preprint server for biology (2023)
Diffuse optical methods including speckle contrast optical spectroscopy and tomography (SCOS and SCOT), use speckle contrast ( k ) to measure deep blood flow. In order to design practical systems, parameters such as signal-to-noise ratio (SNR) and the effects of limited sampling of statistical quantities, should be considered. To that end, we have developed a method for simulating speckle contrast signals including effects of detector noise. The method was validated experimentally, and the simulations were used to study the effects of physical and experimental parameters on the accuracy and precision of k . These results revealed that systematic detector effects resulted in decreased accuracy and precision of k in the regime of low detected signals. The method can provide guidelines for the design and usage of SCOS and/or SCOT instruments.
Keyphrases
  • blood flow
  • high resolution
  • magnetic resonance
  • high speed
  • contrast enhanced
  • air pollution
  • low grade
  • mental health
  • physical activity
  • single cell
  • monte carlo
  • single molecule
  • molecular dynamics
  • clinical practice