Transformation of Pathology Reports Into the Common Data Model With Oncology Module: Use Case for Colon Cancer.

Borim Ryu Eunsil Yoon Seok Kim Sejoon Lee Hyun Young Baek Soyoung Yi Hee Young Na Ji-Won Kim Rong-Min Baek Hee Hwang Sooyoung Yoo

Published in: Journal of medical Internet research (2020)

This study aimed to prepare CDM data for a research platform to take advantage of all omics clinical and patient data at Seoul National University Bundang Hospital for colon cancer pathology. A more sophisticated preparation of the pathology data is needed for further research on cancer genomics, and various types of text narratives are the next target for additional research on the use of data in the CDM.

Keyphrases

electronic health record
big data
healthcare
emergency department
palliative care
adverse drug
machine learning
data analysis
young adults
lymph node metastasis
quality improvement
smoking cessation
deep learning
papillary thyroid
squamous cell