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Characterization of the complete chloroplast genome of Allium tuberosum.

Hongxia WangXiang LiFahui YeLirong WangJiuli WangWenjie Chen
Published in: Mitochondrial DNA. Part B, Resources (2019)
Allium tuberosum is a popular vegetable, condiment, and even a traditional Chinese medicine. Here, the complete chloroplast genome sequence of Allium tuberosum was reported. The size of the chloroplast genome is 154,056 bp in length, including a large single copy region (LSC) of 83,068 bp, a small single copy region (SSC) of 17,958 bp, and a pair of inverted repeat (IR) regions with 26,515 bp. The Allium tuberosum chloroplast genome encodes 132 genes, including 87 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic tree analysis suggested that Allium tuberosum was closely related to Allium sativum.
Keyphrases
  • genome wide
  • arabidopsis thaliana
  • bioinformatics analysis
  • genome wide identification
  • dna methylation