Exploring the Antiangiogenic and Anti-Inflammatory Potential of Homoisoflavonoids: Target Identification Using Biotin Probes.
Xiang FeiSangil KwonJinyoung JangMinyoung SeoSeongwon YuTimothy W CorsonSeung-Yong SeoPublished in: Biomolecules (2024)
Chemical proteomics using biotin probes of natural products have significantly advanced our understanding of molecular targets and therapeutic potential. This review highlights recent progress in the application of biotin probes of homoisoflavonoids for identifying binding proteins and elucidating mechanisms of action. Notably, homoisoflavonoids exhibit antiangiogenic, anti-inflammatory, and antidiabetic effects. A combination of biotin probes, pull-down assays, mass spectrometry, and molecular modeling has revealed how natural products and their derivatives interact with several proteins such as ferrochelatase (FECH), soluble epoxide hydrolase (sEH), inosine monophosphate dehydrogenase 2 (IMPDH2), phosphodiesterase 4 (PDE4), and deoxyhypusine hydroxylase (DOHH). These target identification approaches pave the way for new therapeutic avenues, especially in the fields of oncology and ophthalmology. Future research aimed at expanding the repertoire of target identification using biotin probes of homoisoflavonoids promises to further elucidate the complex mechanisms and develop new drug candidates.
Keyphrases
- small molecule
- living cells
- fluorescence imaging
- single molecule
- anti inflammatory
- mass spectrometry
- bioinformatics analysis
- nucleic acid
- fluorescent probe
- photodynamic therapy
- palliative care
- liquid chromatography
- high resolution
- high performance liquid chromatography
- ms ms
- deep learning
- label free
- high throughput sequencing