ProcaryaSV: structural variation detection pipeline for bacterial genomes using short-read sequencing.
Robin JugasHelena VitkovaPublished in: BMC bioinformatics (2024)
The ProcaryaSV pipeline provides an integrative approach to structural variation detection from paired-end next-generation sequencing of bacterial samples. It can be easily installed and used on Linux machines. It is publicly available on GitHub at https://github.com/robinjugas/ProcaryaSV .